See our Learn section for information on getting started with the AnVIL platform. Importantly, AnVIL will ease the process of acquiring access to protected datasets for investigators and drastically reduce the burden of performing large-scale integrated analyses across many datasets to fully realize the potential of ongoing data production efforts. Long-term, the AnVIL will provide a unified platform for ingestion and organization for a multitude of current and future genomic and genome-related datasets. Platform InteroperabilityĪnVIL is a member of the NIH Cloud Platform Interoperability Effort (NCPI) and is collaborating with the NCPI working groups to establish and implement technical standards enabling cross platform authentication and authorization, cross platform data discovery, and the cross platform exchange of datasets, analysis tools, and derived data. DatasetsĪnVIL provides access to key NHGRI datasets, such as the CCDG (Centers for Common Disease Genomics), CMG (Centers for Mendelian Genomics), eMERGE (Electronic Medical Records and Genomics), as well as other relevant datasets. Interact with AnVIL data, analysis solutions, and workflows via a command line interface. Bioconductor and Galaxy provide environments for users at different skill levels to construct and execute analyses. The Gen3 data commons framework provides data and metadata ingest, querying, and organization. Dockstore provides standards based sharing of containerized tools and workflows. The Terra platform provides a compute environment with secure data and analysis sharing capabilities. The platform is built on a set of established components that have been used in a number of flagship scientific projects. The NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-Space, or AnVIL, inverts the traditional model, providing a cloud environment for the analysis of large genomic and related datasets.īy providing a unified environment for data management and compute, AnVIL eliminates the need for data movement, allows for active threat detection and monitoring, and provides elastic, shared computing resources that can be acquired by researchers as needed. From the NHGRI Genomic Data Science Analysis, Visualization and Informatics Lab-space (AnVIL) poster presented at #T2THPRC.
#Anvil software support software#
Additionally, some widely-used application software is provided. This suite of software includes compilers, debuggers, visualization libraries, development environments, and other commonly used software libraries. Not only are transfer/download costs prohibitive, but this approach also leads to redundant siloed compute infrastructure and makes ensuring security and compliance of protected data highly problematic. The Anvil team provides a suite of broadly useful software for users of research computing resources.
#Anvil software support download#
The traditional model of genomic data sharing – centralized data warehouses such as dbGaP from which researchers download data to analyze locally – is increasingly unsustainable. AnVIL is NHGRI's Genomic Data Science Analysis, Visualization, and Informatics Lab-Space.
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